63 lines
1.8 KiB
Python
63 lines
1.8 KiB
Python
#!/usr/bin/python3
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import spintrum
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import math
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import matplotlib.pyplot as plt
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import numpy as np
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import time
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gammas = [4257.7e4,4257.7e4,4257.7e4,4257.7e4,4257.7e4,4257.7e4,1070.8e4]
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multips = [2,2,2,2,2,2,2]
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jCouplings = \
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[
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[0,7.54,1.38,0.661,1.38,7.54,158.354],
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[0,0,7.543,1.377,0.658,1.373,1.133],
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[0,0,0,7.535,1.382,0.658,7.607],
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[0,0,0,0,7.535,1.377,-1.296],
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[0,0,0,0,0,7.543,7.607],
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[0,0,0,0,0,0,1.133],
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[0,0,0,0,0,0,0]
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]
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BThermal = 1.8e0
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T2 = 10
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sampleRate = 1e3
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T= 1/sampleRate
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points = 80000
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gammah = 2*math.pi*4257.7
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spinOp = spintrum.SpinOperations()
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spinOp.add_operation(spintrum.SpinOperations.OPERATION__THERMAL_POPULATE,
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{'Bx': 0, 'By': 0, 'Bz': BThermal, 'T': 293.778})
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spinOp.add_operation(spintrum.SpinOperations.OPERATION__TIP_SPINS,
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{'direction': 'y', 'BVsTArea': 4*math.pi/gammah})
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spinOp.add_operation(spintrum.SpinOperations.OPERATION__SET_HAMILTONIAN,
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{'Bx': 0, 'By': 0, 'Bz': 0})
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spinOp.add_operation(spintrum.SpinOperations.OPERATION__INIT_TIME_INDEPENDENT_EVOLUTION,
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{'samplingRate': sampleRate, 'measurementDirection': 'z'})
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spinOp.add_operation(spintrum.SpinOperations.OPERATION__EVOLVE_TIME_INDEPENDENT,
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{'points': points, 'threads': 4})
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start_time = time.time()
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signal = spintrum.simulate(gyromagneticRatios=gammas,
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jCouplings=jCouplings,
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spinMultiplicities=multips,
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spinOperations=spinOp)
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signal = signal - np.mean(signal)
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signal = [signal[i]*math.exp(-i/sampleRate/T2) for i in range(len(signal))]
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print("Simulation lastet: " + repr(time.time()-start_time) + "s")
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plt.plot(signal)
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plt.show()
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fft = spintrum.FFTSpectralDensity(signal, sampleRate)
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plt.plot(fft['x'], fft['y'])
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plt.show()
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